CDS
| Accession Number | TCMCG016C23851 |
| gbkey | CDS |
| Protein Id | OMO58940.1 |
| Location | complement(join(60328..60643,60738..60836,61364..64415,64582..64903,65371..65474,66788..66908,67016..67276,68655..69071)) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_25244 |
Protein
| Length | 1563aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01014065.1 |
| Definition | IKI3 family protein [Corchorus capsularis] |
| Locus_tag | CCACVL1_25244 |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11373
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGTCCACCGCAATCCACCCCAATTACCATTTTATCCCGGCCCCCACTCCCCTCTCCCGCCGTTTCCGCCGCCGCCACCATCTTCCCATTCTCCTCCGGCAACCCAACAATCACCTTCCTCTCACCTACACACAATGCAGCAGTAGCAGTGGTAGCAGCGGCAGATTCACGTGCAAAGCCACCCAAGTGTCTTCCGTGAGCGAAGAAGAAGGGTCATCTGCCTCCGGCGGTGGTGGTGAGAACTGGGTTCCGGTGGTCCCTCTGGCGGCTCTGCCCAAGGGAGAGCGGCGCGTTATAATTCAAGACGGGGAGACCATACTGTTGCTTTGGTATAAGGATCAGGTTTTTGCTATTGAGAATCGCTCCCCTGCTGAAGGTGCTTACACTGAAGGCTTGCTCAACGCCAAGCTCACCCAGGATGGTTGTATAGTCTGTCCCACAACTGATAGCACATTTGACCTAAGGACTGGAGCCATAAAGGAATGGTACCCAAAGAATCCAGTGCTGCGAGTCCTTACACCTGCTTTGAGGTCATTGTTTGTTTACCCGGTAAAATTGGATGAAGAAAATATTTATATTAGCATTAGAGGCGGTATTAAATCTGACGCAGCCGCAGAGATTGTCTTCAGTGGTAAAGCTCAACCTGGTGTAACTGCCTCTGATGTCAATGTAGATGAGGTTAAAATGGTGGTTGATGAGGGCTCAGAGGGCTTCGGATTTACGGGAAAGAATGAAATCATAAATGGGAAGGCTGCAATTATCGGCTTCCTGCTGTTGCTGGATTTTGAACTCTTGACTGAAGGCGAAGTATTACTGTTCTCTGCATATGATATTGAGAGAAATCGCTTCTTCTTTGCCTCTTCGGATAATCTCATTTACACTCTCCATCTTTCTTCTTTCCAAAATGAAAGGGCATGGAGCAAAGGTTCACTACAAGCAGAAATTGATACCTTGGATTTGGAGCCTGAAGATGTCATTACTTCCTTTGATTATCTTATGGAGAAAGAAGCACTAATAGTGGGTACGTCTAGTGGGCTCTTACTTCTGCATACAGTGGATGGAAAGGAAACAGAAGTTGTTGGCCGGGTGGAGGGTGGAGTCAAGTGCATCTCCCCAAGTCCCGATGGAGACCTGCTTGGTGTAACCACTGGTTTTGGGCAATTACTAGTCATGACTCATGATTGGGATTTGTTGTATGAGACTGCATTGGAGGACCATCCTGAAGGTGAATTAGATTTTCCGTCACGAGATTTTGGTAGCCCCATTTCTTGGAGAGGAGATGGGAAGTACTTTGCCACTCTAAGCGAGGAGTCAAATTCTTCTGTGAAAAAGAGGCTTAAGGTCTGGGAACGGGATGCTGGAGCATTACATGCTACATCAGAACCAAAGGAATTAATGGGAGCTACTCTGGAATGGATGCCTAGTGGAGCAAAAATTGCAGCTGTTTGTGAGAGGAAGGCAGAGAAGAAAGGCCCATCCATAGTTTTCTATGAAAGGAATGGGTTAGAAAGAAGCTCATTTAACATTAATGAACCGATGGATGCAACTGTAGAACTTCTGAAGTGGAATTGCAGTTCTGATCTTCTTGCAGCCATTGTAAGATCTGTAAATTATGATTCTGTTAAGATCTGGTCTTTCAGCAACAATCATTGGTATCTAAAGCATGATATCAAATACTTGAGGAAAAATGGAGTTAGGTTCATGTGGGATCCGACAAAGCCACAGCAATTAATCTGTTGGACTCTTGGTGGGCAGGTTACAGTTTACAAATTCATCTGGGTTACAGCTGTCATGGAAGACTCAACAGCTTTAGTTATTGATGACTCTAAAATACTTGTGACCCCCCTTTCTTTGTCCTTAATGCCACCTCCTATGCATTTATTCAGCCTTAATTTTCCCATTCCTGTTCGTGAAATGGCTTTTCATTCCATAAAAGGTAAGACTCGTTTAGCGGCATTCTTATCAAATGGCTGTCTGTGTGTAGCAGAGCTCCCTGCACCTGATACTTGGGAAGAACTAGAGGGCAAGGAATTTAACGTGGAACATTGTCTATCTGAATCATTGGGATCCTTTGTACATCTTACGTGGCTGGACTCAAACTTGCTTCTTGCTGTTTCTCATTATGGATTTAATCACAGTAATTGTTCTTCCCAATCCTCTTCAAGTGAGGATATGATTGGTTTCTACTTACAGGAGATTGAGCTCGCTTGTTCTGAGGATAATGTCCCAGGTTTAGTGACCGGCTCTGGATGGCATGCAAGAGTTTCCTATCAAAATTTGTTGGAAGGTCTAGTACTGGGCATTGTTCCTAATCCAGCTAAAAGATGCTCAGCTTTTGTTCAGTTTGATGGTGGAGAAGTTCTTGAATATTCATCAAAGTTGGGAATTGCCAGAAGGGATTTGAATCATGGTGAGACTAGTTTTTCTTCTTCTTGCCCCTGGATGAACGCAGTTCTGGTAGGTGCCAGTGAACTGTCAAAGCCCTTGCTCTTTGGTCTTGATGACTTGGGTAGGCTGCATGTTGGTAGGAGAATACTATGCAGCAACTGCAGCAGTTTCTCTTTTTACTCAAACCTTGCTGACAATGTGATTACACATTTGATTCTTGCAACAAAACAAGATTTGCTCTTTATTGTTGACATAAGTGATATATTGCATGGAGAACTGGAATTAACATATGAGAACTTTATCCATGTTGGTAGCAAACGAAAGCAAGAGGAAAATATTAACTTCATAAATATATGGGAAAGAGGGGCCAAAATTGTTGGTGTCCTGCATGGAGATGAAGATGCTGTCATATTGCAAACAAATCGTGGAAACTTAGAATGCATCTATCCAAGAAAATTGGTGCTGGCCTCAATTTTCAATGCTTTGAACCAAAGACGCTTTAGGGATGCCCTTCTTATGGTGAGGCGTCACAGGATTGATTTCAATGTGATTGTAGATTATTCTGGGCTGCAAGTGTTTCTTCAATTGGCTTCTGAGTTTGTCAGACAGGTCAACAACTTGAGTTACATAACTGAGTTTGTCTGTGCCATCAAAAATGAAAATATAACAGAGACACTTTACAAGAAGTTTCTATCTCTGCCTTACTGCAAGGAGCAAAAGGATGTACAAGCCAGCGACTTCAATGCTAGTTTAGAAACTAACAAAGTGTCATCAGTCCTCCTCGCCATAAGGAGGGCTCTTGAGGAACAAGTACCAGAAAGTCCTGCAAGGGAGCTCTGTATTTTGACCACTTTGGCTCGTAGCGATCCCCCTGCTCTTGAAGAAGCTTTGGAGAGGGTTAAAGTTATCCGGGAGATGGAGTTATTAGGTTCTGATGACCCAAGACGAAAGAATCGACCTTCTGCCGAGGAAGCTCTGAAACACCTCTTGTGGTTATCGGATTCAGAGGCTGTGTTTGAAGCTGCTCTGGGCCTTTATGATTTGAACCTTGCAGCTATTGTGGCACTGAACTCCCAGCGAGACCCTAAGGAATTTCTTCCGTTTCTCCAAGAATTGGAGCGTATGCCAGCTCTCTTGATGCGCTATAACATTGACCTTAGGTTGCACAGGTTTGAGAAAGCTCTCAAACACATTGTATCAGCAGGTGATACCCATTTTGCTGATTGCATGAACCTTATGAAGAAAAATCCTCAACTTTATCCTCTAGGACTGCAGTTGATAACAGATCCTCCGAAGAGAGGGCAAGTCCTTGAGGCTTGGGGGGATCATCTTAGTGATGAAAAATGCTTTGAAGATGCTGCCGCAACTTACTTGTGTTGCTCCAGTTTGCAGAAGGCTTTGAAGGCATACCGTGAATGTGGTAATTGGAGTGGTGTGCTGACAGTTGCTGGGCTTATAAAGTTGGAAAGAGATGAAGTAATGCAATTGGCTCATGAGCTTTGTGAAGAACTCCAAGCCCTGGGCAAACCAGGAGAAGCTGCGAAAATTGCTTTGGACTACTGTGGAGATGTTAATGCTGGGATTAATTTGCTAATTAGTGCAAGGGAGTGGGAGGAGGCTCTGAGGGTTGCTTTTCTGCATAGAAGAGAGGACTTAGTCTCGGAAGTGGAAAATGCATCATTGGATTGTGCAAGCAGTCTAATTGATGAATATAAGGAAGGGTTGGAGAAAGTGGGAAAATATTTGGCTCGCTATTTAGCTGTTCGACAAAGAAGATTGTTGCTTGCAGCAAAGCTCCGTTCAGAGGAAAGGTCAATAAATGATCTTGATGATGATACTGCTTCTGAAGCTAGCAGTACATTCAGTGGAATGAGCGTCTATACAACAGGGAGTAGAAAGAGCTCTGCTGCTTCCACTGGATCAACTGTGGCTAGTAGGGCTAGAGATGCAAGACGTCAGCGAAGCAGAGGAAAAATTCGCCCTGGCAGTCCTGGTGAGGAGATGGCTCTTGTAGAACATTTGAAAGGCATGTCTCTAACAGCTGGAGCAAAGCATGAGCTCAAGTCCTTGTTGATTTCTCTTGTAATGCTTGGCAAGGAAGAAACTGCGCGGAAGTTGCAACAGGTGGCAGAGAACTTTCAACTATCTCACATTGCAGCAGTCAGACTAGCTGAAGATACAGTGTCTAGTGATAGCATAAATGAACATGCACATACTTTGGAGCGTTATTTACAGAAAGTGAAAACTGAAGTGCCAGATGCAGATACTTTTTCATGGCGCTGTAGAGTATTCCTTTCTCCTTAG |
| Protein: MSTAIHPNYHFIPAPTPLSRRFRRRHHLPILLRQPNNHLPLTYTQCSSSSGSSGRFTCKATQVSSVSEEEGSSASGGGGENWVPVVPLAALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGAIKEWYPKNPVLRVLTPALRSLFVYPVKLDEENIYISIRGGIKSDAAAEIVFSGKAQPGVTASDVNVDEVKMVVDEGSEGFGFTGKNEIINGKAAIIGFLLLLDFELLTEGEVLLFSAYDIERNRFFFASSDNLIYTLHLSSFQNERAWSKGSLQAEIDTLDLEPEDVITSFDYLMEKEALIVGTSSGLLLLHTVDGKETEVVGRVEGGVKCISPSPDGDLLGVTTGFGQLLVMTHDWDLLYETALEDHPEGELDFPSRDFGSPISWRGDGKYFATLSEESNSSVKKRLKVWERDAGALHATSEPKELMGATLEWMPSGAKIAAVCERKAEKKGPSIVFYERNGLERSSFNINEPMDATVELLKWNCSSDLLAAIVRSVNYDSVKIWSFSNNHWYLKHDIKYLRKNGVRFMWDPTKPQQLICWTLGGQVTVYKFIWVTAVMEDSTALVIDDSKILVTPLSLSLMPPPMHLFSLNFPIPVREMAFHSIKGKTRLAAFLSNGCLCVAELPAPDTWEELEGKEFNVEHCLSESLGSFVHLTWLDSNLLLAVSHYGFNHSNCSSQSSSSEDMIGFYLQEIELACSEDNVPGLVTGSGWHARVSYQNLLEGLVLGIVPNPAKRCSAFVQFDGGEVLEYSSKLGIARRDLNHGETSFSSSCPWMNAVLVGASELSKPLLFGLDDLGRLHVGRRILCSNCSSFSFYSNLADNVITHLILATKQDLLFIVDISDILHGELELTYENFIHVGSKRKQEENINFINIWERGAKIVGVLHGDEDAVILQTNRGNLECIYPRKLVLASIFNALNQRRFRDALLMVRRHRIDFNVIVDYSGLQVFLQLASEFVRQVNNLSYITEFVCAIKNENITETLYKKFLSLPYCKEQKDVQASDFNASLETNKVSSVLLAIRRALEEQVPESPARELCILTTLARSDPPALEEALERVKVIREMELLGSDDPRRKNRPSAEEALKHLLWLSDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPFLQELERMPALLMRYNIDLRLHRFEKALKHIVSAGDTHFADCMNLMKKNPQLYPLGLQLITDPPKRGQVLEAWGDHLSDEKCFEDAAATYLCCSSLQKALKAYRECGNWSGVLTVAGLIKLERDEVMQLAHELCEELQALGKPGEAAKIALDYCGDVNAGINLLISAREWEEALRVAFLHRREDLVSEVENASLDCASSLIDEYKEGLEKVGKYLARYLAVRQRRLLLAAKLRSEERSINDLDDDTASEASSTFSGMSVYTTGSRKSSAASTGSTVASRARDARRQRSRGKIRPGSPGEEMALVEHLKGMSLTAGAKHELKSLLISLVMLGKEETARKLQQVAENFQLSHIAAVRLAEDTVSSDSINEHAHTLERYLQKVKTEVPDADTFSWRCRVFLSP |